Job Description P60664 Confidence 79.28% Date Thu Jan 5 12:07:01 GMT 2012 Rank 466 Aligned Residues 152 % Identity 15% Template d1umya_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.5

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		P	L	A	K	R	Y	A	E	E	G	A	D	E	L	V	F	Y	D	I	T	A	S	S	D	G	R	V	V	D	K	S	W	V	S	R	V	A	E	V	I	D	I	P	F	C	V	.	.	.	.	.	.	.	.	.	A	G	G	I	K	S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I	A	E	Y	F	E	.	.	.	.	.	H	V	E	E	A	V	W	A	V	E	A	L	K	T	S	G	K	P	I	A	A	T	M	C	I	G	P	E	G	D	L	H	G	V	S	P	G	E	C	A	V	R	L	V	K	A	G	A	A	I	V	G	V	N	C
Template Known Secondary structure										T	T		S								S	.	.	.	.	.														T	T		S										T	T			T	T														T	T		S						S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.										.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																					.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	.	.	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	.	.	.	.	.	.	.	.	.	V	T	Q	W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E
Query Conservation																					.	.																															.	.	.	.	.	.	.	.	.
Alig confidence			.	.																	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		H	.	.	F	D	P	S	T	S	L	Q	T	I	K	L	M	K	E	G	L	E	A	A	R	L	K	A	Y	L	M	S	Q	P	L	A	Y	H	T	P	D	C	G	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y
Template Known Secondary structure		S	.	.	S																		T	T	T											S	B			T	T			S	S	T	G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T
Template Predicted Secondary structure			.	.
Template SS confidence
		218			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	E	V	C
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	G	G	C	C	G	F	E	P	Y	H	I	R	A	I	A	E	E	L
Template Known Secondary structure			.	.	.	.	.	.	.	.				T	T													T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.
Template SS confidence
		296									.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions