|   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
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|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
. | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . |
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
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|
|
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|
|
|
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|
|
| . |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
|
| . |
. |
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|
Query Sequence |   |
A | K | R | Y | A | E | E | G | A | D | E | L | V | F | . |
. |
Y | D | I | T | A | S | S | D | G | R | V | V | . |
. |
. |
. |
. |
. |
. |
. |
D | K | S | W | V | S | R | V | A | E | V | I | D | I | P | F | C | V | A | . |
. |
. |
. |
. |
G | G | . |
. |
I | K | S | L | E | D | A | A | K | I | L | S | F | G | A | D |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
| . | . |   |
|
|
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   | . | . | . | . | . |
|
| . | . |
|   |
|   |
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|   |   |   |
|   |   |
|
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|
Alig confidence |   |
|
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|
| . | . |
|
|
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|
| . | . | . | . | . | . | . | . |
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|
| . | . | . | . | . |
|
| . | . |
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|
Template Conservation |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
Template Sequence |   |
A | L | L | A | Q | R | A | G | Y | Q | A | I | Y | L | S | G | G | G | V | A | A | G | S | L | G | L | P | D | L | G | I | S | T | L | D | D | V | L | T | D | I | R | R | I | T | D | V | C | S | L | P | L | L | V | D | A | D | I | G | F | G | S | S | A | F | N | V | A | R | T | V | K | S | M | I | K | A | G | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |
|  |  |  |
|  |  |  |  |  |  | T | T | S |
|
|
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |
| T | T |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
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|
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  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
99 | 100 | . | . | |
|
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|
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|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
Query Sequence |   |
K | I | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | S | P | A | L | A | D | P | T | L | I | T | R | L | A | D | R | F | G | V | Q | C | I | V | V | G | I | D | T | W | Y | D | A | E | T | G | K | Y | H | V | N | Q | Y | T | G | D | E | S | R | T | R | V | T | Q | W | E | T | L | D | W | V | Q | E | V |
Query Conservation |   |
  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
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|
| . | . |
|
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|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |   | . | . |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
G | L | H | I | E | D | Q | V | G | A | K | R | C | G | H | R | P | N | K | A | I | V | S | K | E | E | M | V | D | R | I | R | A | A | V | D | A | K | T | . |
. |
D | P | D | F | V | I | M | A | R | T | D | A | L | A | V | E | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | A | I | E | R | A | Q | A | Y |
Template Known Secondary structure |   |
 |  |  |  |  |
| B |
|
|
| S | S | T | T |
|
| S |
|
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | . | . | S | T | T | S |  |  |  |  |  |  |
|
|  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
. | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
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|
|
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|
|
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| . |
. |
. |
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|
Query Sequence |   |
Q | K | R | G | A | G | E | I | V | L | N | M | M | N | Q | D | G | V | R | N | G | Y | D | L | E | Q | L | K | K | V | R | E | V | C | H | V | P | L | I | A | S | . |
. |
. |
G | G | A | G | T | M | E | H | F | L | E | A | F | R | D | A | D | V | D | G | A | L | A | A | S | V | F | H | K |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |
|
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|
|   | . | . | . |
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|   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
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|
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|
| . | . | . | . | . | . | . | . |
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| . | . | . |
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| . |
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|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   | . |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | E | A | G | A | E | M | L | F | P | E | A | I | T | . |
. |
. |
. |
. |
. |
. |
. |
E | L | A | M | Y | R | Q | F | A | D | A | V | Q | V | P | I | L | A | N | I | T | E | F | G | A | T | P | L | F | T | T | D | E | . |
L | R | S | A | H | V | A | M | A | L | Y | P | L | S | A | F | R |
Template Known Secondary structure |   |
 |  | T | T |
| S |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| S |
| B |  |  |  |
|
| S | S | S | S | S |
|
|
|
|  |  |  | . |  |  |  | T | T |
| S |  |  |  |  | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |
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|
|  |  |  | . |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
  |