|   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | R | N | H | E | I | I | G | D | I | V | P | L | A | K | R | Y | A | E | E | G | A | D | E | L | V | F | Y | D | I | T | A | S | S | D | G | R | V | V | D | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | W | V | S | R | V | A | E | V | I | D | I | P | F | C | V | A | G | G | I | K | S | L | E | D | A | A | K |
Query Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|
|
| . | . | . |
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   | . |   |   |   |
|
|
|
| . | . |
|
|   |   |   |   |
|   |
|   |
Template Sequence |   |
G | G | K | F | N | N | V | E | S | A | V | T | R | V | K | A | M | M | D | E | G | A | D | . |
. |
. |
I | I | D | V | G | G | V | S | T | R | P | G | H | E | M | I | T | V | E | E | E | L | N | R | V | L | P | V | V | E | A | I | V | G | . |
F | D | V | K | I | S | V | . |
. |
D | T | F | R | S | E | V | A | E | A |
Template Known Secondary structure |   |
T | T | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . |  |  |  |  |  | S |
|
|
| S | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | S | S | S |  |  |  |  | . | . |  |
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  | . | . |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | |
|
. | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | S | F | G | A | D | K | I | S | I | N | S | P | A | L | A | D | P | T | L | I | T | R | L | A | D | R | F | G | V | Q | C | I | V | V | G | I | D | T | W | Y | D | A | E | T | G | K | Y | H | V | N | Q | Y | T | G | D | E | S | R | T | R | V | T | Q | W | E | T | L | D | W | V | Q | E | V | Q | K | R | G | A |
Query Conservation |   |
  |
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
| . |   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |   |
|
|
Template Sequence |   |
C | L | K | L | G | V | D | I | I | N | D | Q | W | A | G | L | Y | D | . |
H | R | M | F | Q | V | V | A | K | Y | D | A | E | I | V | L | M | H | N | G | N | G | N | R | D | E | P | V | V | E | E | M | L | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | A | Q | A | H | Q | A | K | I | A | G | I |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|  |  |  |  | T | T | T | T | S | S |
| . | T |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|
|
| T | T |
|
| S |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
. | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
G | E | I | V | L | N | M | M | N | Q | D | G | V | R | N | G | Y | D | L | E | Q | L | K | K | V | R | E | . |
. |
V | C | H | V | P | L | I | A | S |
Query Conservation |   |
. | . |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|   |   | . | . |   |   |   |
|
|
|
|
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
P | S | N | K | I | W | L | D | P | G | I | G | F | A | K | T | R | N | E | E | A | E | V | M | A | R | L | D | E | L | V | A | T | E | Y | P | V | L | L | A |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |
|
| T | T | S | S |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T | T |
| S |
| B |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |