Job Description P60664 Confidence 95.81% Date Thu Jan 5 12:07:01 GMT 2012 Rank 295 Aligned Residues 192 % Identity 14% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		33	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure									.	.	.	.												.	.	.	.	.	.											.	.
Query SS confidence									.	.	.	.												.	.	.	.	.	.											.	.
Query Sequence		V	P	L	A	K	R	Y	.	.	.	.	A	E	E	G	A	D	E	L	V	F	Y	.	.	.	.	.	.	D	I	T	A	S	S	D	G	R	V	.	.	V	D	K	S	W	V	S	R	V	A	E	V	I	D	I	P	F	C	V	A	G	G	I	K	S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I
Query Conservation									.	.	.	.												.	.	.	.	.	.											.	.
Alig confidence									.	.	.	.												.	.	.	.	.	.											.	.																				.	.															.
Template Conservation																																																													.	.															.
Template Sequence		L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	.	.	D	V	H	E	P	H	Q	C	Q	P	V	A	E	V	.	C	D	V	I
Template Known Secondary structure																T									S			T	T	S		T	T	S				S																							.	.				S											.		S
Template Predicted Secondary structure																																																													.	.															.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		S	I	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	.	E	I	V	L	N	M	M
Query Conservation																																																																										.
Alig confidence																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	.	.	G	N	V	V	N	I	K	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G
Template Known Secondary structure					G	G	G	T	T												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		G	G	G											T	T
Template Predicted Secondary structure																					.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.																						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure										.													.								.	.	.	.	.
Query SS confidence										.													.								.	.	.	.	.
Query Sequence		N	Q	D	G	V	R	N	G	.	Y	D	L	E	Q	L	K	K	V	R	E	V	.	C	H	V	P	L	I	A	.	.	.	.	.	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation										.													.								.	.	.	.	.
Alig confidence										.													.								.	.	.	.	.
Template Conservation
Template Sequence		S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R
Template Known Secondary structure					S	S	S						T										T	T	T							T	T	T	T		S	S	G	G	G										T	T			S												S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions