Job Description P60664 Confidence 96.38% Date Thu Jan 5 12:07:01 GMT 2012 Rank 253 Aligned Residues 141 % Identity 10% Template c3qldB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: structure of probable mandelate racemase (aalaa1draft_2112) from2 alicyclobacillus acidocaldarius Resolution 1.85 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E
Query Conservation
Alig confidence																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	S	V	D	A	A	V	E	Q	G	F	R	R	V	K	L	K	I	A	P	G	R	D	R	A	A	I	K	A	V	R	L	R	Y	P	D	.	.	L	A	I	A	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	S	Y	R	P	E	D	A	P	V	L	R	Q
Template Known Secondary structure											T	T		S							B	T	T	B	S												T	T	.	.	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				G	G	G
Template Predicted Secondary structure																																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.																					.	.	.	200	.	.	.	.	.	.	.	.	.	210
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q	I	I	N	I	G	E	L	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		L	D	A	Y	D	L	Q	F	I	.	.	.	.	.	.	.	E	Q	P	L	P	E	D	D	W	F	D	L	A	K	L	Q	A	S	L	R	T	P	V	C	L	D	E	S	V	R	S	V	R	E	L	K	L	T	A	R	L	G	A	A	R	V	L	N	V	K	P	G	R	L	G	G	F	G	A	T	L	R	A	L
Template Known Secondary structure		G	G	G	G			S			.	.	.	.	.	.	.				S		T	T											T		S	S					S	T	T			S											T			S										T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		246	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	A	T	Q	G	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	A	G	E	A	G	X	A	A
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions