|   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | |
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|
. | . | . | . | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | |
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|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
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|
|  |  |  |  | . | . |  |
|
|  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
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|
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|
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|
| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
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| . |
. |
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| . |
. |
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. |
. |
. |
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|
Query Sequence |   |
A | K | R | Y | A | E | E | G | A | D | E | L | V | F | . |
. |
Y | D | I | T | A | S | S | D | G | R | V | V | . |
. |
. |
. |
. |
. |
. |
. |
D | K | S | W | V | S | R | V | A | E | V | I | . |
. |
D | I | P | F | C | V | . |
. |
. |
. |
. |
. |
A | G | G | I | K | S | L | E | D | A | A | K | I | L | S | F | G | A |
Query Conservation |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
| . | . |   |
|
|
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   | . | . |   |   |
|
|   |   | . | . | . | . | . | . |   |
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|   |
|   |
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|   |   |   |
|   |   |
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|
Alig confidence |   |
|
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|
| . | . |
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| . | . | . | . | . | . | . | . |
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| . | . |
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| . | . | . | . | . | . |
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|
Template Conservation |   |
|
|   |   |
|   |
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|   |
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
Template Sequence |   |
A | R | T | A | M | E | L | G | F | K | S | L | Y | M | T | G | A | G | T | T | A | S | R | L | G | Q | P | D | L | A | I | A | Q | L | H | D | M | R | D | N | A | D | M | I | A | N | L | D | P | F | G | P | P | L | I | A | D | M | D | T | G | Y | G | G | P | I | M | V | A | R | T | V | E | H | Y | I | R | S | G | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
| S | S | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | T | T | S |
|
|  |  |  |  |
| T | T |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
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  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | |
|
|
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|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
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|
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|
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|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
D | K | I | S | I | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | A | L | A | D | P | T | L | I | T | R | L | A | D | R | F | G | V | Q | C | I | V | V | G | I | D | T | W | Y | D | A | E | T | G | K | Y | H | V | N | Q | Y | T | G | D | E | S | R | T | R | V | T | Q | W | E | T | L | D | W | V | Q | E | V |
Query Conservation |   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
|
Template Conservation |   |
  |
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
A | G | A | H | L | E | D | Q | I | L | T | K | K | V | V | S | R | D | E | Y | L | V | R | I | R | A | A | V | A | T | K | R | R | L | R | S | D | F | V | L | I | A | R | T | D | A | L | Q | S | L | G | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | C | I | E | R | L | R | A | A |
Template Known Secondary structure |   |
|  |  |  |  |
|
| B |
|
|
|
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
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|
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|
|
. | . | . | . | . | . | . | . | 240 |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |
|
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|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
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| . |
. |
. |
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|
Query Sequence |   |
Q | K | R | G | A | G | E | I | V | L | N | M | M | N | Q | D | G | V | R | N | G | Y | D | L | E | Q | L | K | K | V | R | E | V | C | . |
. |
. |
H | V | P | L | I | A | S | G | G | A | G | T | M | E | H | F | L | E | A | F | R | D | A | D | V | D | G | A | L | A | A | S | V | F | H | K |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   | . | . | . |   |
|
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|   |
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|   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |   |
Alig confidence |   |
|
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|
|
| . | . | . | . | . | . | . | . |
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| . | . | . |
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|
Template Conservation |   |
  |   |
|
|
|
|   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
R | D | E | G | A | D | V | G | L | L | E | G | F | R | . |
. |
. |
. |
. |
. |
. |
. |
S | K | E | Q | A | A | A | A | V | A | A | L | A | P | W | P | L | L | L | N | S | V | E | N | G | H | S | P | L | I | T | V | E | E | A | K | A | M | G | F | R | I | M | I | F | S | F | A | T | L | A |
Template Known Secondary structure |   |
 |  | T | T |
| S |  |  |  |  |
|
|
| S | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| B |  |  |  |  |  | T | T | S | S | S |
|
|
|
|  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | T | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
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|
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
  |