 |
Job Description | P60664 | Confidence | 92.59% | Date | Thu Jan 5 12:07:01 GMT 2012 |
Rank | 385 | Aligned Residues | 73 |
% Identity | 18% | Template | c3krsB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:triosephosphate isomerase; |
PDBTitle: structure of triosephosphate isomerase from cryptosporidium parvum at2 1.55a resolution
|
Resolution | 1.55 Å |
|
 |
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | L | N | M | M | N | Q | D | G | V | R | N | G | Y | D | L | E | Q | L | K | K | V | R | E | V | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | V | P | L | I | A | S | G | G | A | G | T | M | E | H | F | L | E | A | F | R | D | A | D | V | D | G | A | L | A | A | S | V | F | H | K | Q | I | I |
Query Conservation |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   | . |   | . |
Template Sequence |   |
I | A | Y | E | P | I | W | A | I | G | T | G | V | V | A | T | P | G | Q | A | Q | E | A | H | A | F | I | R | E | Y | V | T | R | M | Y | N | P | Q | V | S | S | N | L | R | I | I | Y | G | G | S | V | . |
T | P | D | N | C | N | E | L | I | K | C | A | D | I | D | G | F | L | V | G | G | A | S | L | K | . |
P | . |
Template Known Secondary structure |   |
 |  |  |
|
| G | G | G | S | S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
|
|  |  |  |
| S |
|
| . |
| T | T | T |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  | S | G | G | G | G | S | . | T | . |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |
|
| . |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | G | E | L | K | A | Y | L | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|   |
Template Sequence |   |
T | F | A | K | I | I | E | S | A | Q |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|