Job Description P60664 Confidence 96.15% Date Thu Jan 5 12:07:01 GMT 2012 Rank 269 Aligned Residues 146 % Identity 15% Template c3h12B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50 Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		86	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		L	E	D	A	A	K	I	L	S	F	G	A	D	.	.	K	I	S	I	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V
Query Conservation															.	.
Alig confidence															.	.																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	E	L	A	G	W	V	E	Q	G	F	T	A	A	K	L	K	V	G	R	A	P	R	K	D	A	A	N	L	R	A	M	R	Q	R	V	G	A	D	.	V	E	I	L	V	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	S	L	G	R	H	D	A	L	A	M	L
Template Known Secondary structure												T		S							S	S																		S	S	.	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.																				.	.	.	.	.	.	.	210	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	.	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q	I	I	N	I	G
Query Conservation																																				.
Alig confidence													.	.	.	.	.	.	.																	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		R	I	L	D	E	A	G	C	Y	W	F	.	.	.	.	.	.	.	E	E	P	L	S	I	D	D	I	E	G	H	R	I	L	R	A	Q	G	T	P	V	R	I	A	T	G	E	N	L	Y	T	R	N	A	F	N	D	Y	I	R	N	D	A	I	D	V	L	Q	A	D	A	S	R	A	G	G	I	T	E	A	L
Template Known Secondary structure							T	T		S			.	.	.	.	.	.	.		S		S		T	T										T	T			S	S						T	T													T	T			S						T	T	T	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	A	Y	L	A	T	Q	G	V	E	I	R	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	S	A	S	A	A	S	A	H	L	A	W	N	P	H
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions