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Job DescriptionP60664
Confidence98.90%DateThu Jan 5 12:07:01 GMT 2012
Rank97Aligned Residues211
% Identity16%Templatec3femB_
PDB info PDB header:biosynthetic protein, transferaseChain: B: PDB Molecule:pyridoxine biosynthesis protein snz1; PDBTitle: structure of the synthase subunit pdx1.1 (snz1) of plp synthase from2 saccharomyces cerevisiae
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50..... ....60.........70.........80.........90.........100......
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Query Sequence  VPLAKRYAEEGADELVFYDITAS. . . . . . SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA
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Template Sequence  PEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVL
Template Known Secondary structure  TTT
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   107..110.........120.........130. ........140.........150.........160.........170.........180...
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Query Sequence  LADPTLITRLADRFGVQCIVVGIDT. . . WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG
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Template Sequence  TPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTK. . . . . . GEAGTGDVSEAVKHIRRITEEIKACQQLKSED
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   107..110.........120.........130.........140........ .150.........160.........170.........180
 
   184.....190.........200..... ....210.........220.........230.........240.........250
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Query Sequence  . . . . . . VRNGYDLEQLKKVREVCHVPLI. . ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT
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Template Sequence  DIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADA. ALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEA
Template Known Secondary structure  TT

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   181........190.........200.........210.........220. ........230.........240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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