Job Description P60664 Confidence 96.74% Date Thu Jan 5 12:07:01 GMT 2012 Rank 221 Aligned Residues 178 % Identity 17% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.													.	.	.	.	.	.	.	.																				.	.	.	.	.							.
Query SS confidence																.	.													.	.	.	.	.	.	.	.																				.	.	.	.	.							.
Query Sequence		A	K	R	Y	A	E	E	G	A	D	E	L	V	F	.	.	Y	D	I	T	A	S	S	D	G	R	V	V	.	.	.	.	.	.	.	.	D	K	S	W	V	S	R	V	A	E	V	I	D	I	P	F	C	V	A	.	.	.	.	.	G	G	I	K	S	L	.	E	D	A	A	K	I	L	S	F	G	A	D	K
Query Conservation																.	.													.	.	.	.	.	.	.	.																				.	.	.	.	.							.
Alig confidence																.	.													.	.	.	.	.	.	.	.																				.	.	.	.	.							.
Template Conservation
Template Sequence		A	K	M	A	E	A	V	G	F	K	A	V	Y	L	S	G	G	G	V	A	A	N	S	L	G	I	P	D	L	G	I	S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	N	I	A	R	T	I	R	S	F	I	K	A	G	V	G	A
Template Known Secondary structure								T	T		S																S		S	S	S																				S							T	T		S	S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		100	.	.														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E	V
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	.	.	.	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	I	.	.	.	.	.	.	.	.	.	.	.	D	A	A	I	E	R	A	I	A	Y
Template Known Secondary structure							B						T	T							B																		.	.	.	S		T	T	S															.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	.	.	.	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K
Query Conservation																																								.	.	.
Alig confidence															.	.	.	.	.	.	.	.																		.	.	.															.
Template Conservation															.	.	.	.	.	.	.	.																																			.
Template Sequence		V	E	A	G	A	D	M	I	F	P	E	A	M	.	.	.	.	.	.	.	.	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	L	D	E	.	L	K	G	A	N	V	D	I	A	L	Y	C	C	G	A	Y	R
Template Known Secondary structure					T		S								.	.	.	.	.	.	.	.		S													S		B						T	T	S	S	S								.				T	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																			.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions