Return to main results Retrieve Phyre Job Id

Job DescriptionP60664
Confidence71.52%DateThu Jan 5 12:07:01 GMT 2012
Rank499Aligned Residues68
% Identity22%Templatec3e5bB_
PDB info PDB header:lyaseChain: B: PDB Molecule:isocitrate lyase; PDBTitle: 2.4 a crystal structure of isocitrate lyase from brucella2 melitensis
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180....... ..190 .........200. .......
Predicted Secondary structure 













.....

.........

...................


.
Query SS confidence 
























. . . . .


. . . . . . . . .










. . . . . . . . . . . . . . . . . . .






.
Query Sequence  VQEVQKRGAGEIVLNMMNQDGVRNG. . . . . YDL. . . . . . . . . EQLKKVREVCH. . . . . . . . . . . . . . . . . . . VPLIASG.
Query Conservation         
   

   
   
   
..... 
 .........


  
     ...................




 
.
Alig confidence 
























.....


.........










...................






.
Template Conservation 
 
   


 


 

   


        

 

    

   
  
  
    
             
  





 
Template Sequence  AMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAGPELAKRINRTLQRADQIETAEGKGLSVDTWFAPIVADAE
Template Known Secondary structure  TT
S



TT
S


SSS
S
TTTS

SSS
S



T
Template Predicted Secondary structure 































Template SS confidence 















































































   70.........80.........90.........100.........110.........120.........130.........140.........
 
   209210..... ....220.........230
Predicted Secondary structure  .



...



Query SS confidence  .






. . .














Query Sequence  . GAGTMEH. . . FLEAFRDADVDGALA
Query Conservation  .

 
  
...    
   
 
 


Alig confidence  .






...














Template Conservation 

 
    
 
 
     

 


 
Template Sequence  AGFGGPLDAFEIMKAYIEAGAAGVHF
Template Known Secondary structure  TTTSST
S
Template Predicted Secondary structure 








Template SS confidence 

























   150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions