Job Description P60664 Confidence 96.64% Date Thu Jan 5 12:07:01 GMT 2012 Rank 226 Aligned Residues 143 % Identity 10% Template c3ddmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50 Resolution 2.60 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		L	E	D	A	A	K	I	L	S	F	G	A	D	.	.	K	I	S	I	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V
Query Conservation															.	.
Alig confidence															.	.																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	V	V	A	R	K	A	A	E	G	Y	R	A	F	K	L	K	V	G	F	D	D	A	R	D	V	R	N	A	L	H	V	R	E	L	L	G	A	A	.	T	P	L	M	A	D	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	W	D	L	P	R	A	R	Q	M	A
Template Known Secondary structure												T									S	S																		S	S	.	S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.																				.	.	210	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	.	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q	I	I	N	I	G
Query Conservation																												.
Alig confidence													.	.	.	.	.	.	.									.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		Q	R	L	G	P	A	Q	L	D	W	L	.	.	.	.	.	.	.	E	E	P	L	R	A	D	R	P	A	A	E	W	A	E	L	A	Q	A	A	P	M	P	L	A	G	G	E	N	I	A	G	V	A	A	F	E	T	A	L	A	A	R	S	L	R	V	M	Q	P	D	L	A	K	W	G	G	F	S	G	C	L
Template Known Secondary structure					G	G	G						.	.	.	.	.	.	.				S		T	T	S													S	S						T	T			S											T									T	T	T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230								.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	K	A	Y	L	A	T	Q	G	V	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	R	A	V	V	A	A	G	L	R	Y
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions