Job Description P60664 Confidence 98.61% Date Thu Jan 5 12:07:01 GMT 2012 Rank 125 Aligned Residues 212 % Identity 11% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		M	L	A	K	R	I	I	P	C	L	D	V	R	D	G	Q	V	V	K	G	V	Q	F	R	N	H	E	I	I	G	D	I	V	P	L	A	K	R	Y	A	E	E	G	A	D	E	L	V	F	Y	D	I	T	A	S	S	D	G	R	V	V	.	D	K	S	W	V	S	R	V	A	E	V	I	D	I	P	F	C	V
Query Conservation																																																															.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.										.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template Sequence		L	K	Q	Q	K	L	S	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	.	T	H	C	F	K	D	V
Template Known Secondary structure			T	T							G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	.	T	T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.															20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	G	G	I	K	S	L	E	D	.	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A	L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E
Query Conservation											.
Alig confidence											.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	L	X	V	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	L	C	P	E	T
Template Known Secondary structure						S												T	T		S						T	T		T	T	S									T	T						T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																		130	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.																											.	.
Query SS confidence																																											.	.	.	.	.	.	.	.																											.	.
Query Sequence		T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	E	V	.	.	.	.	.	.	.	.	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	.	.	D	G	A
Query Conservation																																											.	.	.	.	.	.	.	.																											.	.
Alig confidence													.																														.	.	.	.	.	.	.	.												.					.										.	.
Template Conservation													.																																																	.					.
Template Sequence		P	I	S	E	L	E	P	Y	L	D	Q	.	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	K	L	I	N	I	D	G	S	X	.	T	L	E	L	.	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L
Template Known Secondary structure			G	G	G	G	T	T	T	T	T	T	.		S						S			T	T	T	T																				G	G	G	G	G	G							S	S		.					.							S	S	S
Template Predicted Secondary structure													.																																																	.					.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	S	V	F	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		V	S	G	S	A	L	F	S	G	E	.	.	L	K	T	N	L	K	V	W	K	S
Template Known Secondary structure					G	G	G	G	S	S		.	.
Template Predicted Secondary structure												.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions