Job Description P60664 Confidence 72.02% Date Thu Jan 5 12:07:01 GMT 2012
Rank 498 Aligned Residues 83
% Identity 16% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
158 . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E T L D W V Q E V Q K R G A G E I V L N M M N Q D G V R N G Y D L E Q L K K V R E V C H V P L I A S G G A G T M E H F L E A F R D A D V D G A L A A S V F H K Q
Query Conservation  
                                                                                                 
Alig confidence  
. . . . . . . . . .
Template Conservation  
                              .                 . .                                                       .             . . . . . .  
Template Sequence  
N G E E A V R C A P D L R P D I A L V .
D I M L C G A L D G .
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V E T A A R L A A G C N L P I I F I T S S Q D V E T F Q R A K .
R V N P F G Y L .
.
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A K
Template Known Secondary structure  
S S . S S S S S . . S . T T S . . . . . . S
Template Predicted Secondary structure  
. . . . . . . . . .
Template SS confidence  
   
40 . . . . . . . . . 50 . . . . . . . .
. 60 . . . . . . . .
. 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . .
100 . . . . . . .
. .
 
   
238 . 240 . . . . . . . . . 250
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
I I N I G E L K A Y L A T
Query Conservation  
                         
Alig confidence  
Template Conservation  
                   
Template Sequence  
P V A A D T L H R S I E M
Template Known Secondary structure  
S
Template Predicted Secondary structure  
Template SS confidence  
   
110 . . . . . . . . . 120 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]