Job Description P60664 Confidence 88.67% Date Thu Jan 5 12:07:01 GMT 2012 Rank 421 Aligned Residues 82 % Identity 20% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q
Query Conservation
Alig confidence																														.	.	.	.																																.									.	.	.	.	.	.
Template Conservation																														.	.	.	.																																.									.	.	.	.	.	.
Template Sequence		D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	.	.	.	.	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L	T	A	K	D	S	E	I	D	K	V	I	G	L	.	E	I	G	A	D	D	Y	V	.	.	.	.	.	.	T	K
Template Known Secondary structure		S														S						T	T		S	S	S			.	.	.	.													S								T	T										.		T	T						.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.																																.									.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.							100	.
		238	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	S	T	R	E	L	L	A	R	V	K	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions