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Job Description | P60664 | Confidence | 95.29% | Date | Thu Jan 5 12:07:01 GMT 2012 |
Rank | 325 | Aligned Residues | 91 |
% Identity | 15% | Template | c2v9dB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:yage; |
PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12
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Resolution | 2.15 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | L | D | W | V | Q | E | V | Q | K | R | G | A | G | E | I | V | L | N | M | M | N | Q | D | G | V | R | N | G | Y | D | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | A | A | L | I | D | D | L | I | K | A | G | V | D | G | L | F | F | L | G | S | G | G | E | F | S | Q | L | G | A | E | E | R | K | A | I | A | R | F | A | I | D | H | V | D | R | R | V | P | V | L | I | G | T | G | G | T | N | A | R | E | T | I | E | L | S | Q | H | A | Q | Q | A | G | A | D | G | I | V | V | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
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232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | V | F | H | K | Q | I | I | N | I | G | E | L | K | A | Y | L | A | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | P | Y | Y | W | K | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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116 | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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