Job Description P60664 Confidence 98.95% Date Thu Jan 5 12:07:01 GMT 2012 Rank 91 Aligned Residues 154 % Identity 16% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A	L	A	.	.	.	.	.	.	.	.	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.												.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R	L	L	T	K	.	.	.	.	.	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	I	A	.	.	.	.	.	.	P	D	L	T	S
Template Known Secondary structure											G	G	G		S									T	T	S	T	T	S	G	G	G	G	S											.	.	.	.	.							T	S		G	G	G										.	.	.	.	.	.	S
Template Predicted Secondary structure																																													.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	L	K	K	V	R	E	V	C	.	.	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		Q	D	K	E	D	I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E	M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A
Template Known Secondary structure															T										B	S				T	T				T	T	T	T	S	S	S																						T	T	T		S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	.	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation																				.
Alig confidence						.														.
Template Conservation						.
Template Sequence		L	E	K	I	.	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E	A
Template Known Secondary structure						.			T		S					S								T
Template Predicted Secondary structure						.
Template SS confidence
		343	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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