Job Description P60664 Confidence 97.02% Date Thu Jan 5 12:07:01 GMT 2012 Rank 197 Aligned Residues 192 % Identity 16% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.												.
Query SS confidence																				.	.	.	.	.												.
Query Sequence		V	P	L	A	K	R	Y	A	E	E	G	A	D	E	L	V	F	Y	.	.	.	.	.	D	I	T	A	S	S	D	G	R	V	V	.	D	K	S	W	V	S	R	V	A	E	V	I	D	I	P	F	C	V	A	G	G	I	K	S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A
Query Conservation																				.	.	.	.	.												.
Alig confidence																				.	.	.	.	.												.																			.	.															.
Template Conservation																																																							.	.															.
Template Sequence		M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	V	T	V	T	.	.	E	V	M	D	T	R	H	V	E	L	V	A	K	Y	.	S	D	I	L	Q	I	G	A	R	N
Template Known Secondary structure											T	T							B	S	S				S	S	T	T	S					T															T						.	.					G	G	G								.		S						G	G	G
Template Predicted Secondary structure																																																							.	.															.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N
Query Conservation
Alig confidence															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	N	F	E	L	L	K	E	V	G	K	V	.	.	E	N	P	V	L	L	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T
Template Known Secondary structure		T	T									T	T	S	.	.	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T	T	T											B			S
Template Predicted Secondary structure															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.																						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		187	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		G	Y	.	.	.	.	D	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	.	.	.	.	.	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	.	.	.	.	.	.	.	.	F	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A
Query Conservation				.	.	.	.																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																			.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	R	F	T	L	D	I	S	A	V	P	V	V	K	E	L	S	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V	E	V	H	P	E	P	E	K	A	L	S	D	S	Q	Q	Q	L	T	F	D	D	F	L	Q	L	L	K
Template Known Secondary structure		S	S	S	S	B			T	T									B	S	S						S	S	T	T	T		S	G	G	G											T	T		S						B		S	S	G	G	G		S	S		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		250
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions