Job Description P60664 Confidence 98.98% Date Thu Jan 5 12:07:01 GMT 2012 Rank 86 Aligned Residues 170 % Identity 16% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		D	I	V	P	L	A	K	R	Y	A	E	E	G	A	D	E	L	V	F	Y	D	I	T	A	S	S	D	G	R	V	V	D	K	S	W	V	S	R	V	A	E	V	I	.	.	D	I	P	F	C	V	A	G	G	I	K	S	L	E	D	A	A	K	I	L	S	F	G	A	D	K	I	S	I	N	S	P	A	L	A
Query Conservation																																													.	.
Alig confidence																											.	.	.																.	.								.	.	.	.	.	.
Template Conservation																											.	.	.																									.	.	.	.	.	.
Template Sequence		E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	.	.	.	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	P	S	G	S	F	S
Template Known Secondary structure												G	G	G		S							T	T	S		.	.	.														T	T			G	G	G					.	.	.	.	.	.	S							T	T	T								T	T	S
Template Predicted Secondary structure																											.	.	.																									.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	T	L	I	T	R	L	A	D	R	F	G	V	Q	C	I	V	V	G	I	D	T	W	Y	D	A	E	T	G	K	Y	H	V	N	Q	Y	T	G	D	E	S	R	T	R	V	T	Q	W	E	T	L	D	W	V	Q	E	V	Q	K	R	G	A	G	E	I	V	L	N	M	M	N	Q	D	G	V	R	N	G	Y
Query Conservation
Alig confidence				.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation				.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		P	K	.	.	.	.	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	.	.	.	.	.	.	.	R
Template Known Secondary structure				.	.	.	.							T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T		S									.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		85	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																													.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	Q	L	K	K	V	R	E	V	C	H	V	P	L	I	A	S	G	G	A	G	T	M	E	H	F	L	E	A	F	R	D	A	D	V	D	G	A	L	A	A	S	V	F	H	K	Q	I	I	N	I	G	E	L	K	A	Y	L	A	T
Query Conservation
Alig confidence																								.										.
Template Conservation																								.										.
Template Sequence		G	V	S	L	L	S	D	I	K	Q	R	I	S	I	P	V	I	A	I	G	G	M	.	T	P	D	R	L	R	D	V	K	.	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K
Template Known Secondary structure															S						S	S		.		G	G	G						.		T	T		S					S					T	S	S	S
Template Predicted Secondary structure																								.										.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions