 |
Job Description | P28632 | Confidence | 2.38% | Date | Thu Jan 5 11:45:04 GMT 2012 |
Rank | 66 | Aligned Residues | 30 |
% Identity | 17% | Template | d1d1da1 |
SCOP info | Acyl carrier protein-like
| Retrovirus capsid dimerization domain-like
| Retrovirus capsid protein C-terminal domain
|
Resolution | UNK |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | P | A | H | V | R | L | V | M | V | A | N | D | L | P | A | L | T | D | P | L | V | S | D | V | L | R | A | L |
Query Conservation |   |
  |
|
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|   |
|   |   |
|
|
|   |   |
|   |
|
Template Sequence |   |
D | L | P | P | S | A | R | A | P | V | I | I | D | C | F | R | Q | K | S | Q | P | D | I | Q | Q | L | I | R | A | A |
Template Known Secondary structure |   |
S |
|
| T | T | T | T | T |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|