Job Description P31470 Confidence 100.00% Date Thu Jan 5 11:47:59 GMT 2012 Rank 19 Aligned Residues 207 % Identity 15% Template c3nzeB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. Resolution 1.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	M	S	R	V	A	A	H	H	L	L	G	Y	M	S	K	T	R	R	V	N	L	A	I	T	A	G	S	T	P	K	G	M	Y	E	Y	L	T	T	L	V	K	G	K	P	W	Y	D	N	C	Y	F	Y	N	F	D	E	I	P	F	R	G	K	E	G	E	G	V	T	I	T	N	L	R	N	L	F	F	T
Query Conservation
Alig confidence																					.	.																		.	.	.	.	.																			.
Template Conservation																					.	.																		.	.	.	.	.																			.
Template Sequence		D	R	V	A	X	Q	A	A	R	T	I	G	P	L	V	D	S	N	A	.	.	I	I	G	V	A	W	G	A	T	L	S	A	V	S	R	H	L	.	.	.	.	.	T	R	K	X	T	H	D	S	I	V	V	Q	L	N	G	A	G	N	.	X	Q	T	T	G	I	T	Y	A	S	D	I	X	R	R	F	G	S
Template Known Secondary structure													G	G	G			T	T		.	.							S								T	T		.	.	.	.	.						S	S							S					.	T	T	S		S
Template Predicted Secondary structure																					.	.																		.	.	.	.	.																			.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		P	A	G	I	K	E	E	N	I	Q	K	L	T	I	D	N	Y	R	E	.	.	.	.	.	.	.	.	.	.	H	D	Q	K	L	A	R	E	G	G	L	D	L	V	V	L	G	L	G	A	D	G	H	F	C	G	N	L	P	.	N	T	T	H	F	H	E	Q	T	V	E	F	P	I	Q	G	E	M	V	D	I
Query Conservation																					.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		A	Y	G	A	R	V	E	Q	F	P	V	P	A	F	F	D	H	A	S	T	K	T	A	X	W	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	F	G	V	G	S	V	D	S	D	Y	P	S	H	V	Y	A	G	G	Y	L	D	E	H	D	L	T	X	L	A	A	D	D	V	V	G	D
Template Known Secondary structure				T								S		S	S		S									T	T												T	T		S											S	S	S	T	T	S			T	T	S	S	S		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		V	A	H	G	E	L	G	G	D	F	S	L	V	.	.	.	.	P	D	S	Y	V	T	M	G	P	K	S	I	M	A	A	K	N	L	L	I	I	V	S	G	A	G	K	A	Q	A	L	K	N	V	L	Q	G	P	V	T	E	D	V	P	A	S	V	L	Q	L	H	P	S	L	M	V	I	A	D	K	A	A	A
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	T	V	F	F	R	S	D	G	S	S	D	G	I	T	L	N	E	R	S	T	G	P	S	H	E	Q	L	R	Q	V	R	R	R	I	C	V	V	S	G	A	S	K	I	N	G	L	Q	G	A	L	A	A	G	L	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	I	L	D	E	A	S	A
Template Known Secondary structure			T	T					T	T	S			T	T		G	G	G	G	G			S							T	T	S	S								S	G	G	G										T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.														.	.	.	.	.	.	.	.	310
		235	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		311	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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