Job Description P31470 Confidence 100.00% Date Thu Jan 5 11:47:59 GMT 2012 Rank 18 Aligned Residues 215 % Identity 11% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		2	.	.	.	.	.	.									.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		K	L	I	I	T	E	D	.	.	.	.	.	.	.	.	Y	Q	E	M	S	R	V	A	A	H	H	L	L	G	Y	M	S	K	T	R	R	V	N	L	A	I	T	A	G	S	T	P	K	G	M	Y	E	Y	L	T	T	L	V	K	G	K	P	W	Y	D	N	C	Y	F	Y	N	F	D	E	I	P	F	R	G	K
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																					.	.																			.	.	.	.
Template Conservation																																					.	.																			.	.	.	.
Template Sequence		E	A	V	V	A	S	S	D	G	L	L	E	E	E	Q	L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	E	P	G	D	.	.	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	.	.	.	.	Q	R	S	Q	S	R	Q	V	I	C	V	P	I	I	G	G	P	S	G	K	L
Template Known Secondary structure									S																									T	T		.	.							S									T			.	.	.	.			S	S									S	B		B		T	T	S	S
Template Predicted Secondary structure																																					.	.																			.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		74					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure			.	.	.	.																																	.	.	.	.	.
Query SS confidence			.	.	.	.																																	.	.	.	.	.
Query Sequence		E	.	.	.	.	G	E	G	V	T	I	T	N	L	R	N	L	F	F	T	P	A	G	I	K	E	E	N	I	Q	K	L	T	I	D	N	Y	.	.	.	.	.	R	E	H	D	Q	K	L	A	R	E	G	G	L	D	L	V	V	L	G	L	G	A	D	G	H	F	C	G	N	L	P	N	T	T	H	F	H	E
Query Conservation			.	.	.	.																																	.	.	.	.	.
Alig confidence			.	.	.	.																																	.	.	.	.	.																																.
Template Conservation																																																																											.
Template Sequence		E	S	R	Y	H	V	N	T	L	T	Y	G	A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	A	L	V	G	I	G	S	P	A	I	R	D	G	A	N	W	.	H	A	F	Y	G	S
Template Known Secondary structure			G	G	G														T								S	B	S	B		S										T	S											T	T									B		T	T			S	S	S			.				T	T	T
Template Predicted Secondary structure																																																																											.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	V	E	F	P	I	Q	G	E	M	V	D	I	V	A	H	G	E	L	G	G	D	F	S	L	V	P	D	S	Y	V	T	M	G	P	K	S	I	M	A	A	K	N	L	L	I	I	V	S	G	A	G	K	A	Q	A	L	K	N	V	L	Q	G	P	V	T	E	D	V	P	A	S	V	L	Q	L	H	P	S
Query Conservation
Alig confidence																											.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	S	D	D	L	N	A	R	H	V	A	G	D	I	C	S	R	F	Y	D	I	N	G	G	.	L	S	E	K	T	L	S	I	E	M	A	K	L	R	Q	A	R	Y	S	I	G	I	A	M	G	E	E	K	Y	S	G	I	L	G	A	L	H	G	R	Y	I	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T						T	T					T	T	S		.				S	B		B								T	S	S									S	S	S										T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	I	A	D	K	A	A	A	A	E	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	C	L	V	T	N	R	E	T	A	E	L	L
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			302	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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