Return to main results Retrieve Phyre Job Id

Job DescriptionP55135
Confidence99.54%DateThu Jan 5 12:06:06 GMT 2012
Rank59Aligned Residues152
% Identity22%Templated2nxca1
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Ribosomal protein L11 methyltransferase PrmA
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310.........320.........330.
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  NGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLN
Query Conservation   
  
 
 
 



 
      
   
   
       




 
 
     

     
 


    

  
  
   
Alig confidence 









....

















..













































Template Conservation      
 



....
 
 

   
  
     .. 
  








 


 

  
  
  



  
   
  
   
Template Sequence  AEIPLVIEPG. . . . GHHETTRLALKALARHLR. . PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRN
Template Known Secondary structure  SS



....

S

..TT
T
TTSTT
S
GGGT
Template Predicted Secondary structure 





....




..












Template SS confidence 















































































   87..90...... ...100.........110.... .....120.........130.........140.........150.........160
 
   332.......340.........350.........360.........370......... 380.........390........ .400.........
Predicted Secondary structure 



















.




.


Query SS confidence 















































.


















.










Query Sequence  GLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKL. EPIRIVYVSCNPATLARDS. EALLKAGYTIA
Query Conservation 

 

     
    
          
 






 

      
   .    







 




 .  
   

 
 
Alig confidence 

.













.....

























.


















.










Template Conservation    .              .....   

 




    
  
       




 





       
   
   

   
Template Sequence  GV. RPRFLEGSLEAALP. . . . . FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPL
Template Known Secondary structure  T
.

S
GG.....G



GGGTT
Template Predicted Secondary structure 

.





.....



















Template SS confidence 















































































   166. ..170.........180. ........190.........200.........210.........220.........230.........
 
   410.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  RLAMLD
Query Conservation       
Alig confidence 





Template Conservation        
Template Sequence  EEAAEG
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 





   240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions