|   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
|
|
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | M | V | A | R | A | L | E | W | L | D | V | Q | P | E | D | R | V | L | D | L | F | C | G | M | G | N | F | T | L | P | L | A | T | Q | . |
. |
. |
A | A | S | V | V | G | V | E | G | V | P | A | L | V | E | K | G | Q | Q | N | A | R | L | N | G | L | Q | N | V | T | F | Y | H | E | N | L | E | E | D | V | T |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   | . | . | . |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . |
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   | . | . | . | . | . |   |
Template Sequence |   |
P | E | V | V | D | F | M | V | S | L | A | E | A | P | R | G | G | R | V | L | E | P | A | C | A | H | G | P | F | L | R | A | F | R | E | A | H | G | T | A | Y | R | F | V | G | V | E | I | D | P | K | A | L | D | L | P | P | W | A | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | L | A | D | . |
. |
. |
. |
. |
F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S |
| S |  |  |  |  |  |  | S |
| T | T | T |
|
|
|
| T | T |  |  | . | . | . | . | . | . | . | . | . |  |  |  | S |
| . | . | . | . | . | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
| . | . | . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | |
|
|
|
|
90 |
  |
  |   |
349 | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 370 | . | |
. | . | . | . | . | . | . | . | |
|
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  | . |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | P | W | A | K | N | G | F | D | K | V | L | L | D | P | A | R | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | A | A | G | . |
V | M | Q | Q | I | I | K | L | . |
. |
E | P | I | R | I | V | Y | V | S | C | N | P | A | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   | . |   |   |   |   |
|   |   |   | . | . |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
| . | . |   |
|   |
|   |
Template Sequence |   |
L | L | W | E | P | G | E | A | F | D | L | I | L | G | N | P | P | Y | G | I | V | G | E | A | S | K | Y | P | I | H | V | F | K | A | V | K | D | L | Y | K | K | A | F | S | T | W | K | G | K | Y | N | L | Y | G | A | F | L | E | K | A | V | R | L | L | K | P | G | G | V | L | V | F | V | . |
. |
V | P | A | T | W |
Template Known Secondary structure |   |
G | G |
|
|
| S | S |
|  |  |  |  |  |  |
|
|
|
|
|
| B | S |
| T | T | T |
| S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . |
  |
  |   |
395 | |
|
|
|
|
. | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | . |
. |
. |
. |
. |
R | D | S | E | A | L | L | K | A | G | Y | T | I | A | R | L | A | M | L | D | M | F | P | H | T | G | H | L | E | S | M | V | L | F | S | R | V | K |
Query Conservation |   |
| . | . | . | . | . |
|
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |
|   |
|
Alig confidence |   |
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
L | V | L | E | D | F | A | L | L | R | E | F | L | A | R | E | G | K | T | S | V | Y | Y | L | G | E | V | F | P | Q | K | K | V | S | A | V | V | I | R | F | Q | K | S | G |
Template Known Secondary structure |   |
G | T |
| G | G | G |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | S |
| S | T | T |
|
|
|
|  |  |  |  |  |  |  | S | S | S |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |