 |
Job Description | P55135 | Confidence | 98.52% | Date | Thu Jan 5 12:06:06 GMT 2012 |
Rank | 244 | Aligned Residues | 109 |
% Identity | 24% | Template | d2avna1 |
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases
| S-adenosyl-L-methionine-dependent methyltransferases
| UbiE/COQ5-like
|
Resolution | 2.35 |
|
 |
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | V | N | Q | K | M | V | A | R | A | L | E | W | L | D | V | Q | P | E | D | R | V | L | D | L | F | C | G | M | G | N | F | T | L | P | L | A | T | Q | A | A | S | V | V | G | V | E | G | V | P | A | L | V | E | K | G | Q | Q | N | A | R | L | N | G | L | Q | N | V | T | F | Y | H | E | N | L | E | E | D | V |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . | . |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
K | L | Y | H | R | L | I | G | S | F | L | E | E | Y | L | K | . |
. |
N | P | C | R | V | L | D | L | G | G | G | T | G | K | W | S | L | F | L | Q | E | R | G | F | E | V | V | L | V | D | P | S | K | E | X | L | E | V | A | R | E | K | G | V | K | N | . |
. |
. |
. |
. |
. |
V | V | E | A | K | A | E | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | S |
|
|  |  |  |  |  | T |
| T | T |
|  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T |
| S |
| . | . | . | . | . | . |  |  |  |
|
| T | T | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 90 | . | . | . | . | |
|
|
  |
  |   |
348 | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | |
380 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | Q | P | W | A | K | N | G | F | D | K | V | L | L | D | P | A | R | . |
. |
. |
. |
A | G | A | A | G | V | M | Q | Q | I | I | K | L | . |
E | P | I | R | I | V | Y | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
| . | . | . | . |   |
|
|   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
. |
D | L | P | F | P | S | G | A | F | E | A | V | L | A | L | G | D | V | L | S | Y | V | E | N | K | D | K | A | F | S | E | I | R | R | V | L | V | P | D | G | L | L | I | A | T |
Template Known Secondary structure |   |
. | S |
|
| S |
| T | T |
|  |  |  |  |  |  |
| S | S |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|