Return to main results Retrieve Phyre Job Id

Job DescriptionP55135
Confidence100.00%DateThu Jan 5 12:06:06 GMT 2012
Rank3Aligned Residues357
% Identity97%Templated1uwva2
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases (Uracil-5-)-methyltransferase
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSS
Query Conservation   
  
 
     



  

  
  

  
   
            
     



    
           
     
 
Alig confidence 















































































Template Conservation   

 
 
     



      
  

  
   
          
 
     



    
           

    
 
Template Sequence  ERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLXKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQXGFRKAGSS
Template Known Secondary structure 
B


S
TTTTTBTT
S
TTB
TS





SSS
BSTTTTBTTSS
Template Predicted Secondary structure 















































Template SS confidence 















































































   75....80.........90.........100.........110.........120.........130.........140.........150....
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  DIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAP
Query Conservation   

 
  
 
    
   
  

  
           
       
   

             
               
Alig confidence 















































































Template Conservation   

 
  
 
    
      
   
           
       
                                  
Template Sequence  DIVDVKQCPILAPQLEALLPKVRACLGSLQAXRHLGHVELVQATSGTLXILRHTAPLSSADREKLERFSHSEGLDLYLAP
Template Known Secondary structure 

S

TTB
TT
GGGGGTTSS


T
S
Template Predicted Secondary structure 
























Template SS confidence 















































































   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  DSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGV
Query Conservation         
 
        
  
 
 
 



 
      
   
   
       




 
 
     

     
 

Alig confidence 















































































Template Conservation           
           
 
 
 



 
                      



  
 
     

     
  
Template Sequence  DSEILETVSGEXPWYDSNGLRLTFSPRDFIQVNAGVNQKXVARALEWLDVQPEDRVLDLFCGXGNFTLPLATQAASVVGV
Template Known Secondary structure  SSS





TT

SSS


SBT

TT
S
TTTTTTTSS
Template Predicted Secondary structure 




























Template SS confidence 















































































   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   315....320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATL
Query Conservation 
    

  
  
   


 

     
    
          
 






 

      
       







 

Alig confidence 















































































Template Conservation 
    

  
  
   
   

     
    
          
 

 



 
               





 
 
 
Template Sequence  EGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVXQQIIKLEPIRIVYVSCNPATL
Template Known Secondary structure  S
TT

S

TTS

SSSGGGTT

S


TT



SS
Template Predicted Secondary structure 






























Template SS confidence 















































































   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   395....400.........410.........420.........430.
Predicted Secondary structure 









Query SS confidence 




































Query Sequence  ARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSR
Query Conservation 


   
   

 
      



 
 


 
  
 
Alig confidence 




































Template Conservation   

   
   
         
 

 
 


 
  
 
Template Sequence  ARDSEALLKAGYTIARLAXLDXFPHTGHLESXVLFSR
Template Known Secondary structure  TT


STTSS


Template Predicted Secondary structure 











Template SS confidence 




































   395....400.........410.........420.........430.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions