Job Description P55135 Confidence 51.07% Date Thu Jan 5 12:06:06 GMT 2012 Rank 479 Aligned Residues 90 % Identity 18% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		296	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.
Predicted Secondary structure												.	.	.	.	.	.																								.	.																																			.	.
Query SS confidence												.	.	.	.	.	.																								.	.																																			.	.
Query Sequence		G	M	G	N	F	T	L	P	L	A	.	.	.	.	.	.	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	.	.	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	.	.	D	P	A
Query Conservation												.	.	.	.	.	.																								.	.																																			.	.
Alig confidence												.	.	.	.	.	.																								.	.																							.	.	.	.	.	.	.						.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S	G	K	D	Y	S	V	S	A	G	S	.	.	.	.	.	.	.	K	L	V	V	I	T	A	G	A	R
Template Known Secondary structure				S												T	T	T			S							S															T	G	G	G										S	S	G	G	G	G	T	T		.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.
		366	.	.															.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	N	P	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	E	G	E	S	R	L	N	L	V	Q	R	N	V	N	I	F	K	F	I	I	P	N	I	V	K	H	S	P	D	C	I	I	L	V	V	S	N	P	V
Template Known Secondary structure				T	T																										T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions