Job Description P55135 Confidence 99.41% Date Thu Jan 5 12:06:06 GMT 2012 Rank 77 Aligned Residues 148 % Identity 15% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Q	V	N	A	G	V	N	Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N
Query Conservation
Alig confidence									.												.	.																										.																			.	.	.	.	.	.	.	.	.
Template Conservation									.												.	.																										.																			.	.	.	.	.	.	.	.	.
Template Sequence		W	Y	E	P	G	E	D	.	T	Y	T	L	M	D	A	L	E	R	E	.	.	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	R	N	.	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	.	.	.	N	L	V	R	A	D
Template Known Secondary structure		S							.												.	.	T			S							T		T	T								T	T	T	S	.							S							T		S	S	S	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure									.												.	.																										.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.														.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		L	L	C	.	.	.	.	.	S	I	N	Q	E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	E	A	N	R	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R
Template Known Secondary structure		T	T	T	.	.	.	.	.	T	S		G	G	G		S									B	T	T				T	T	T	B			G	G	G													S	S								G	G	G												T	T
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	M	L	D	M	F	P	H	T	G	H	L	E	S	M	V	L	F	S	R	V	K
Query Conservation
Alig confidence													.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		I	L	K	V	R	K	I	L	G	E	T	.	.	.	.	.	V	Y	I	I	K	G	E	K
Template Known Secondary structure									S	S	S		.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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