Job Description P55135 Confidence 98.27% Date Thu Jan 5 12:06:06 GMT 2012 Rank 260 Aligned Residues 120 % Identity 18% Template c3pt6B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(650-1602) in complex with dna Resolution 3.00 Å

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																						.	.																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	.	.	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.																				.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	E	T	L	W	A	I	E	M	W	D	P	A	A	Q	A	F	R	L	N	.	.	.	.	.	N	P	G	T	T	V	F	T	E	D	C	N	V	L	L	K	L	V	M	A	G	E	V	T	N	S	L	G	Q	R	L	P	Q	K
Template Known Secondary structure							T		T	T											T										S	S											.	.	.	.	.		T	T	S					S											T	T		S	B		T	T			B				T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		1143	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.						.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.
				357	.	.	360	.	.	.	.	.	.	.	.																			.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																		.	.	.	.	.	.	.
Query SS confidence		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																		.	.	.	.	.	.	.
Query Sequence		.	.	F	D	K	V	L	L	D	P	A	R	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	.	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	.	.	.	.	.	.	.	V	S	C	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I
Query Conservation		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																		.	.	.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	F	F	L	L	E	N	V	R	N	F	V	S	Y	R	R	S	M	V	L	K	L	T	L	R	C	L	V	R	M	G	Y	Q	C
Template Known Secondary structure		T	T		S									T	T	S			S	S												T	S															S								S	G	G	G	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		1218	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.
		409	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	G	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1298	.	1300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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