Job Description P55135 Confidence 97.47% Date Thu Jan 5 12:06:06 GMT 2012 Rank 304 Aligned Residues 141 % Identity 18% Template c3p9kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde Resolution 2.25 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																											.	.
Query SS confidence																							.																											.	.
Query Sequence		F	I	Q	V	N	A	G	V	N	Q	K	M	V	A	R	A	L	E	W	L	D	.	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	A	.	.	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y
Query Conservation																							.																											.	.
Alig confidence																							.																											.	.												.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.
Template Sequence		F	N	E	G	M	K	N	H	S	I	I	I	T	K	K	L	L	E	L	Y	H	G	F	E	G	L	G	T	L	V	D	V	G	G	G	V	G	A	T	V	A	A	I	A	A	H	Y	P	T	I	K	G	V	N	F	D	L	P	H	V	I	.	.	.	.	.	.	.	S	E	A	P	Q	F	P	G	V	T	H	V
Template Known Secondary structure																							T	T	T	T		S						T		T	T	S											T	T													.	.	.	.	.	.	.	T	T					T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.						.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390													.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																									.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																									.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	.	.	.	.	.	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	.	E	P	I	R	I	V	Y	V	S	C	N	.	.	.	.	.	.	.	.	.	.	.	.	P	A	T	L	A	R	D	S	E	A	.
Query Conservation																									.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence									.	.	.	.	.	.	.										.	.	.	.	.																		.												.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		G	G	D	M	F	K	E	.	.	.	.	.	.	.	V	P	S	G	D	T	I	L	M	K	W	I	L	H	D	W	S	D	Q	H	C	A	T	L	L	K	N	C	Y	D	A	L	P	A	H	G	K	V	V	L	V	Q	C	I	L	P	V	N	P	E	A	N	P	S	S	Q	G	V	F	H	V	D	M	I	M	L
Template Known Secondary structure			S		T	T	T		.	.	.	.	.	.	.					S						S		G	G	G	B																S		T	T										B		S	S			S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
																			401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	K	A	G	Y	T	I	A	R	L	A	M	L	D	M	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	N	P	G	G	R	E	R	Y	E	R	E	F	Q	A	L	A	R	G	A	G	F	T	G	V	K	S	T	Y	I	Y	A	N
Template Known Secondary structure				S	S	B					B												T											T	T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions