 |
Job Description | P55135 | Confidence | 98.56% | Date | Thu Jan 5 12:06:06 GMT 2012 |
Rank | 234 | Aligned Residues | 110 |
% Identity | 19% | Template | c3ou7A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:sam-dependent methyltransferase; |
PDBTitle: dhpi-sam-hep complex
|
Resolution | 2.30 Å |
|
 |
  |   |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | N | Q | K | M | V | A | R | A | L | E | W | L | D | V | Q | P | E | D | R | V | L | D | L | F | C | G | M | G | N | F | T | L | P | L | A | T | Q | A | A | S | V | V | G | V | E | G | V | P | A | L | V | E | K | G | Q | Q | N | A | R | L | N | G | L | Q | N | V | T | F | Y | H | E | N | L | E | E | D | V | T | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |
Template Sequence |   |
M | D | S | A | A | P | A | A | L | E | R | L | R | A | G | N | I | R | G | D | V | L | E | L | A | S | G | T | G | Y | W | T | R | H | L | S | G | L | A | D | R | V | T | A | L | D | G | S | A | E | M | I | A | E | A | G | R | H | . |
. |
. |
. |
G | L | D | N | V | E | F | R | Q | Q | D | . |
. |
. |
. |
. |
L | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |
| S |  |  |  |  |  | S |
| T | T | S |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | . | . | . | . |
|
| T | T |  |  |  |  |  |
|
| . | . | . | . | . | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 100 |
  |
  |   |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | |
380 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | W | A | K | N | G | F | D | K | V | L | L | D | . |
. |
. |
. |
. |
P | A | R | A | G | A | A | G | V | M | Q | Q | I | I | K | L | . |
E | P | I | R | I | V | Y | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|
| . | . | . | . | . |
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
Template Sequence |   |
D | W | T | P | D | R | Q | W | D | A | V | F | F | A | H | W | L | A | H | V | P | D | D | R | F | E | A | F | W | E | S | V | R | S | A | V | A | P | G | G | V | V | E | F | V |
Template Known Secondary structure |   |
S |
|
|
|
| S |
|  |  |  |  |  |  |  | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|