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Job DescriptionP55135
Confidence99.01%DateThu Jan 5 12:06:06 GMT 2012
Rank158Aligned Residues147
% Identity20%Templatec3ocjA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis
Resolution1.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300......... 310.........320.........330..... ....340...
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Query Sequence  AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA. . . SVVGVEGVPALVEKGQQNARLNGLQN. VTFYHENL
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Template Sequence  RERHGHFRRALQRHLR. . PGCVVASVPCGWXSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQD.
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TT
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TTSTTGGG

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   344.....350.........360... ......370......... 380.........
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Query Sequence  EEDVTKQPWAKNGFDKVLLD. . . . . . PARAGAAGVMQQIIKL. EPIRIVYVSC. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . AWKLDTREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDXQAIDPHDLQLQQ
Template Known Secondary structure  ....GGG



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SSGGG







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   176...180.........190.........200.........210.........220.........230.........240.........250.
 
   390.........400.........410.........420...
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Query Sequence  . . . . . . . . . . . . NPATLARDSEALLKAGYTIARLAMLDMFPHTGHL
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Template Sequence  LVFTRLIQPRWNALRTHAQTRAQLEEAGF. . TDLRFEDDRARLFPT
Template Known Secondary structure  TT

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   252.......260.........270.........280 .........290.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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