Job Description P55135 Confidence 98.88% Date Thu Jan 5 12:06:06 GMT 2012 Rank 187 Aligned Residues 136 % Identity 27% Template c3mq2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb Resolution 1.69 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																										.	.	.	.
Query SS confidence																																		.	.																										.	.	.	.
Query Sequence		A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	.	.	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	.	.	.	.	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K
Query Conservation																																		.	.																										.	.	.	.
Alig confidence																																		.	.																										.	.	.	.													.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		D	A	E	F	E	Q	L	R	S	Q	Y	D	D	V	V	L	D	V	G	T	G	D	G	K	H	P	Y	K	V	A	R	Q	N	P	S	R	L	V	V	A	L	D	A	D	K	S	R	M	E	K	I	S	A	K	A	A	A	K	P	A	K	G	G	L	P	N	L	L	Y	L	W	A	T	A	E	.	.	.	.	R
Template Known Secondary structure										T	T	S	S							S		T	T												T	T								S		G	G	G	G								T	S		G	G	G	T			T	T								S	T	.	.	.	.	T
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.								.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.																				.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	.	.	.	.	.	.	.	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	.	E	P	I	R	I	V	Y	V	S	C	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	A	R	D	S	E	A	L	L
Query Conservation																		.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	P	L	S	G	V	G	E	L	H	V	L	M	P	W	G	S	L	L	R	G	V	L	G	S	S	P	E	M	L	R	G	M	A	A	V	C	R	P	G	A	S	F	L	V	A	L	N	L	H	A	W	R	P	S	V	P	E	V	G	E	H	P	E	P	T	P	D	S	A	D	E	W	L	A	P	R	Y	A
Template Known Secondary structure				S											S											T	S	S	S									T													G	G	G	B	T	T	B		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	Y	T	I	A	R	L	A	M	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	G	W	K	L	A	D	C	R	Y	L	E
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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