Job Description P55135 Confidence 99.37% Date Thu Jan 5 12:06:06 GMT 2012 Rank 84 Aligned Residues 110 % Identity 23% Template c3fydA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable dimethyladenosine transferase; PDBTitle: crystal structure of dim1 from the thermophilic archeon,2 methanocaldococcus jannaschi Resolution 1.75 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P
Query Conservation
Alig confidence																																																															.	.											.	.	.	.
Template Conservation																																																															.	.											.	.	.	.
Template Sequence		K	N	F	V	N	K	A	V	E	S	A	N	L	T	K	D	D	V	V	L	E	I	G	L	G	K	G	I	L	T	E	E	L	A	K	N	A	K	K	V	Y	V	I	E	I	D	K	S	L	E	P	Y	A	N	K	L	K	E	L	Y	N	.	.	N	I	E	I	I	W	G	D	A	L	.	.	.	.	K	V	D
Template Known Secondary structure												T	T			T	T									T	T	S										S	S							S		G	G	G												S	.	.	S						S		T	T	.	.	.	.	T	S
Template Predicted Secondary structure																																																															.	.											.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.					.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	K	L	D	F	N	K	V	V	A	N	L	P	Y	Q	I	S	S	P	I	T	F	K	L	I	K	R	G	F	D	L	A	V	L	M
Template Known Secondary structure		G	G	G				S								G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions