Job Description P55135 Confidence 98.97% Date Thu Jan 5 12:06:06 GMT 2012 Rank 171 Aligned Residues 155 % Identity 14% Template c3fteA_ PDB info PDB header:transferase/rna Chain: A: PDB Molecule:dimethyladenosine transferase; PDBTitle: crystal structure of a. aeolicus ksga in complex with rna Resolution 3.00 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		N	Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	.	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K
Query Conservation																																							.
Alig confidence																																							.																		.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		S	E	G	V	L	K	K	I	A	E	E	L	N	I	E	E	G	N	T	V	V	E	V	G	G	G	T	G	N	L	T	K	V	L	L	Q	H	P	L	K	K	L	Y	V	I	E	L	D	R	E	M	V	E	N	L	.	.	.	.	K	S	I	G	D	E	R	L	E	V	I	N	E	D	A	S	K	F	P	F	C
Template Known Secondary structure																	T	T							S			S	S							T	T	S			S							S		T	T	T	G	G	G	G	.	.	.	.		S	S			T	T	B			B		S		T	T	S			G	G
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.												.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																.	.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	.	.	E	P	I	R	I	V	Y	V	.	.	.	.	.	.	.	.	.	.	.	S	C	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I	A	R	L	A	M	L	D	M
Query Conservation																																.	.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.																											.	.									.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.	.																																																																	.
Template Sequence		S	.	.	.	L	G	K	E	L	K	V	V	G	N	L	P	Y	N	V	A	S	L	I	I	E	N	T	V	Y	N	K	D	C	V	P	L	A	V	F	M	V	Q	K	E	V	A	E	K	L	Q	G	K	K	D	T	G	W	L	S	V	F	V	R	T	F	Y	D	V	.	N	Y	V	M	T	V	P	P	R	F	F
Template Known Secondary structure		G	.	.	.	T		S	S	B								T	T	T										T	T	G	G	G		S																S	S	S																.								T	T	S	S
Template Predicted Secondary structure			.	.	.																																																																	.
Template SS confidence
		91				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	H	T	G	H	L	E	S	M	V	L	F	S	R	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	P	P	K	V	Q	S	A	V	I	K	L	V	K	N	E
Template Known Secondary structure		S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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