Return to main results Retrieve Phyre Job Id

Job DescriptionP55135
Confidence99.23%DateThu Jan 5 12:06:06 GMT 2012
Rank111Aligned Residues125
% Identity12%Templatec3cbgA_
PDB info PDB header:transferaseChain: A: PDB Molecule:o-methyltransferase; PDBTitle: functional and structural characterization of a2 cationdependent o-methyltransferase from the3 cyanobacterium synechocystis sp. strain pcc 6803
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300...... ...310.........320.........330... ..
Predicted Secondary structure 



















...






.

Query SS confidence 














































. . .


























.

Query Sequence  PRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLAT. . . QAASVVGVEGVPALVEKGQQNARLNGL. QN
Query Conservation 
 



 
      
   
   
       




 
 
     

 ...    
 


    

  
  
   


. 
Alig confidence 





















....




















...


























.

Template Conservation        
    
 

  
    .... 
  




 
 
 
   

        
  

        
       
    
Template Sequence  PGAPMQISPEQAQFLGLLISLT. . . . GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEK
Template Known Secondary structure  TTGGGS

....T



TTSTTS
TT
S
T
GGG
Template Predicted Secondary structure 








....




















Template SS confidence 















































































   38.40.........50......... 60.........70.........80.........90.........100.........110...
 
   336...340.........350.. .......360.........370......... 380........
Predicted Secondary structure 


..












.


Query SS confidence 
















. .


























.








Query Sequence  VTFYHENLEEDVTKQPW. . AKNGFDKVLLDPARAGAAGVMQQIIKL. EPIRIVYVS
Query Conservation 
     
    
     ..     
 






 

      
   .    




Alig confidence 
















..


























.








Template Conservation 
    


 
 
            
 



         
      
 


 

 
Template Sequence  ISLRLGPALATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID
Template Known Secondary structure  S
TSSS



S
GGGT
Template Predicted Secondary structure 


















Template SS confidence 























































   114.....120.........130.........140.........150.........160.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions