Return to main results Retrieve Phyre Job Id

Job DescriptionP55135
Confidence99.65%DateThu Jan 5 12:06:06 GMT 2012
Rank38Aligned Residues154
% Identity19%Templatec2yxlA_
PDB info PDB header:transferaseChain: A: PDB Molecule:450aa long hypothetical fmu protein; PDBTitle: crystal structure of ph0851
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   276...280.........290.........300...... ...310.........320.........330.........340.........350..
Predicted Secondary structure 











...











Query SS confidence 






























. . .













































Query Sequence  ARALEWLDVQPEDRVLDLFCGMGNFTLPLAT. . . QAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPW
Query Conservation    
   
       




 
 
     

 ...    
 


    

  
  
   


 

     
    
     
Alig confidence 






























...












































.
Template Conservation   
    
    
  


 


 



  

        
 
 
    

  
     
 
   
     
         .
Template Sequence  AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIG.
Template Known Secondary structure 


TT
SS
TT
TTT
S
S
TT

S
S
TT

SSSS
.
Template Predicted Secondary structure 






























.
Template SS confidence 















































































   249250.........260.........270.........280.........290.........300.........310.........320.......
 
   353......360......... 370......... 380.. ....... 390.........400...
Predicted Secondary structure 











.........................
.


.
..
Query SS confidence 
















. . . . . . . . . . . . . . . . . . . . . . . . .









.


.






. .













Query Sequence  AKNGFDKVLLDPARAGA. . . . . . . . . . . . . . . . . . . . . . . . . AGVMQQIIKL. EPI. RIVYVSC. . NPATLARDSEALLK
Query Conservation       
 






 

.........................      
   .   . 





..

 




   
  
Alig confidence  .















.........................









.


.






..













Template Conservation  .   

 

 




  
   
 
             
   
  

  
   




 







   


 

   
 
Template Sequence  . EEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLN
Template Known Secondary structure  .SS





GGGTTTSTT

TTSTTS


GGGT
Template Predicted Secondary structure  .





























Template SS confidence 















































































   328.330.........340.........350.........360.........370.........380.........390.........400......
 
   404 .....410.. .......420..... ....430.
Predicted Secondary structure 
..

..........






..
Query SS confidence 
. .







. . . . . . . . . .












. .





Query Sequence  A. . GYTIARLA. . . . . . . . . . MLDMFPHTGHLES. . MVLFSR
Query Conservation   ..

 
    ..........  



 
 


 ..
  
 
Alig confidence 
..







..........












..





Template Conservation                            
     



 
 
 
Template Sequence  VHPEFKLVPLKSPYDPGFLEGTMRAWPHRHSTIGFFYALLEK
Template Known Secondary structure 
SS




SSS
SSTT

SS


Template Predicted Secondary structure 
























Template SS confidence 









































   407..410.........420.........430.........440........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions