Job Description P55135 Confidence 99.83% Date Thu Jan 5 12:06:06 GMT 2012 Rank 19 Aligned Residues 218 % Identity 17% Template c2yx1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein mj0883; PDBTitle: crystal structure of m.jannaschii trna m1g37 methyltransferase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																										.	.																									.	.	.																.	.
Query SS confidence																										.	.																									.	.	.																.	.
Query Sequence		G	T	L	M	I	L	R	H	T	A	P	L	S	S	A	D	R	E	K	L	E	R	F	S	.	.	H	S	E	G	L	D	L	Y	L	A	P	D	S	E	I	L	E	T	V	S	G	E	M	P	.	.	.	W	Y	D	S	N	G	L	R	L	T	F	S	P	R	D	.	.	F	I	Q	V	N	A	G	V	N	Q
Query Conservation																										.	.																									.	.	.																.	.
Alig confidence																										.	.																									.	.	.																.	.
Template Conservation
Template Sequence		G	D	L	V	I	L	Q	I	S	D	E	V	D	E	K	I	R	K	E	I	G	E	L	A	Y	K	L	I	P	C	K	G	V	F	R	R	K	R	V	R	E	L	E	H	L	A	G	E	N	R	T	L	T	I	H	K	E	N	G	Y	R	L	W	V	D	I	A	K	V	Y	F	S	P	R	L	G	G	E	R	A
Template Known Secondary structure		T	T						B		S		S																S			S																											T	T							T	T	T	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	.	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P
Query Conservation																																																																	.
Alig confidence							.	.	.	.	.	.																								.																													.												.	.	.	.	.
Template Conservation							.	.	.	.	.	.																								.																																									.	.	.	.	.
Template Sequence		R	I	X	K	K	.	.	.	.	.	.	V	S	L	N	D	V	V	V	D	X	F	A	G	V	G	P	F	S	I	A	C	K	N	.	A	K	K	I	Y	A	I	D	I	N	P	H	A	I	E	L	L	K	K	N	I	K	L	N	K	L	E	H	K	I	I	P	I	L	S	D	V	R	E	V	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.	.			T	T						T	T		T	T	S						T	T	T	.	S	S							S															T	T		T	T	T						S		G	G	G		.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.																								.																																									.	.	.	.	.
Template SS confidence
		188	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.												.
Query SS confidence																																																							.												.
Query Sequence		W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	.	G	Y	T	I	A	R	L	A	M	L	D	.	M	F	P	H	T	G	H	L	E	S	M	V	L	F
Query Conservation																																																							.												.
Alig confidence		.	.																																																				.												.
Template Conservation		.	.
Template Sequence		.	.	D	V	K	G	N	R	V	I	X	N	L	P	K	F	A	H	K	F	I	D	K	A	L	D	I	V	E	E	G	G	V	I	H	Y	Y	T	I	G	K	D	F	D	K	A	I	K	L	F	E	K	K	C	D	C	E	V	L	E	K	R	I	V	K	S	Y	A	P	R	E	Y	I	L	A	L	D	F	K	I
Template Known Secondary structure		.	.												T	T	T	G	G	G	G																					S	S	S											S															T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions