Job Description P55135 Confidence 56.60% Date Thu Jan 5 12:06:06 GMT 2012 Rank 457 Aligned Residues 91 % Identity 15% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370
Predicted Secondary structure																							.	.	.																		.	.																														.
Query SS confidence																							.	.	.																		.	.																														.
Query Sequence		M	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	.	.	.	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	.	.	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	.	P	A	R	A	G	A	A
Query Conservation																							.	.	.																		.	.																														.
Alig confidence																							.	.	.																		.	.																														.
Template Conservation
Template Sequence		A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K	F	K	K	A	D	V	L	I	I	D	T	A	G	R	H	K	E	E
Template Known Secondary structure																						S				T	T	G	G	G	S	S							S	S							S	S	S			S	S	S	T	T							T	T	S	S		S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		371		.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.
Predicted Secondary structure			.								.	.	.	.
Query SS confidence			.								.	.	.	.
Query Sequence		G	.	V	M	Q	Q	I	I	K	.	.	.	.	L	E	P	I	R	I	V	Y	V
Query Conservation			.								.	.	.	.
Alig confidence			.								.	.	.	.
Template Conservation
Template Sequence		K	G	L	L	E	E	M	K	Q	I	K	E	I	T	N	P	D	E	I	I	L	V
Template Known Secondary structure											T	T	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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