Job Description P55135 Confidence 99.48% Date Thu Jan 5 12:06:06 GMT 2012 Rank 71 Aligned Residues 157 % Identity 17% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		S	G	T	L	M	I	L	R	H	T	A	P	L	S	S	A	D	R	E	K	L	E	R	F	S	H	S	E	.	.	.	.	.	.	.	G	L	D	L	Y	L	A	P	D	S	E	I	L	E	T	V	S	G	E	M	P	W	Y	D	S	N	G	L	R	L	T	F	S	P	R	D	F	I	Q	V	N	A	G	V	N
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	D	I	F	V	V	G	E	N	R	S	G	V	R	S	A	E	Q	X	L	A	D	Y	A	P	L	N	K	V	D	S	A	R	R	C	G	L	Y	F	G	R	L	E	K	Q	P	V	F	D	A	E	K	F	W	G	E	Y	S	V	D	G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G
Template Known Secondary structure		T									G	G	G	T	G	G	G						T	T	T	S									T	T										S						G	G	G	G							T	T							T	T		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	A	.	.	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K
Query Conservation																																							.	.
Alig confidence					.	.	.																																.	.																										.														.	.
Template Conservation					.	.	.																																																											.														.	.
Template Sequence		S	Q	L	.	.	.	L	L	S	T	L	T	P	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R	A	T	L	A	A	N	G	V	.	E	G	E	V	F	A	S	N	V	F	S	E	V	.	.
Template Known Secondary structure					.	.	.					S		T	T			S	B			B	T	T		T	T	S											T	T		B						S	B														T	T		.								S	T	T	T	T		.	.
Template Predicted Secondary structure					.	.	.																																																											.														.	.
Template SS confidence
		185	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	G	R	F	D	X	I	I	S	N	P	P
Template Known Secondary structure		.	.	.	.		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						259	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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