Job Description P55135 Confidence 99.00% Date Thu Jan 5 12:06:06 GMT 2012 Rank 163 Aligned Residues 162 % Identity 14% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.					.	.	.
Predicted Secondary structure																																															.	.																											.	.	.	.
Query SS confidence																																															.	.																											.	.	.	.
Query Sequence		F	I	Q	V	N	A	G	V	N	Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	.	.	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	.	.	.	.	Q	N	V
Query Conservation																																															.	.																											.	.	.	.
Alig confidence																										.																					.	.																											.	.	.	.
Template Conservation																										.
Template Sequence		L	T	E	K	D	E	F	A	Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	.	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V
Template Known Secondary structure				T	T	T														T	T	S	S	S		.									T	T									T		T	T									S																	G	G	G	G	S	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.						390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																													.											.	.	.	.	.
Query SS confidence																																													.											.	.	.	.	.
Query Sequence		T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	.	E	P	I	R	I	V	Y	V	S	C	.	.	.	.	.	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I	A	R
Query Conservation																																													.											.	.	.	.	.
Alig confidence																.	.	.															.	.											.											.	.	.	.	.																.
Template Conservation																.	.	.															.	.																																										.
Template Sequence		N	V	F	I	E	D	A	S	K	F	L	E	N	V	.	.	.	T	N	T	Y	D	V	I	I	V	D	S	S	D	N	.	.	Q	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G	Y	A	K	K	L	.	F	K	K	V	E
Template Known Secondary structure						S								T		.	.	.		S													.	.																								T	T	T														T	T	.		S
Template Predicted Secondary structure																.	.	.															.	.																																										.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	M	L	D	M	F	P	H	T	G	H	L	E	S	M	V	L	F	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	N	I	S	I	P	T	Y	P	C	G	C	I	G	I	L	C	C	S	K
Template Known Secondary structure								T	T	S	G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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