 |
Job Description | P55135 | Confidence | 69.99% | Date | Thu Jan 5 12:06:06 GMT 2012 |
Rank | 413 | Aligned Residues | 100 |
% Identity | 14% | Template | c2g04B_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:probable fatty-acid-coa racemase far; |
PDBTitle: crystal structure of fatty acid-coa racemase from mycobacterium2 tuberculosis h37rv
|
Resolution | 2.70 Å |
|
 |
  |   |
286 | . | . | . | 290 | . | . | . | . | . | . | . | |
|
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | D | R | V | L | D | L | F | C | G | M | . |
. |
G | N | F | T | L | P | L | A | T | Q | A | A | S | V | V | G | V | E | G | V | P | A | L | V | E | K | G | Q | Q | N | A | R | L | N | G | L | Q | N | V | T | F | Y | H | E | N | L | E | E | D | V | T | K | Q | P | W | A | K | N | G | F | D | K | V | L | L | D |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|   |
|   | . | . |
|   |   |   |   |   |
|
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
| . | . |
|
|   |
|
|   |
|
|
|
|   |   |
|   |   |
| . | . | . |   |   |   |
|
|
|
|
|   |
|
Template Sequence |   |
A | G | V | K | V | I | E | L | G | G | I | G | P | G | P | H | A | G | M | V | L | A | D | L | G | A | D | V | V | R | V | R | R | P | G | G | L | T | M | P | S | E | D | R | D | L | L | H | R | . |
. |
G | K | R | I | V | D | L | D | V | P | Q | A | M | L | E | L | . |
. |
. |
A | A | K | A | D | V | L | L | D | C |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |
|
|
| S | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T |
|
|
| S | S |
| G | G | G |
| T | T | S | T | . | . | T |
|  |  |  |  |
|
|
|
|
| T | T |  |  |  | . | . | . |  | T | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
. | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
364 | . | . | . | . | . | 370 | . | |
. | . | |
|
. | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  | . |  |  | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | R | A | G | A | A | G | . |
V | M | . |
. |
Q | Q | I | I | K | L | E | P | I | R | I | V | Y | V | S | C | N | P |
Query Conservation |   |
|
|
|   |
|
|   |   | . |   |   | . | . |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |
|
|
|   |   |   |   |
|   |   |   |
|
| . |   |
|
|   |   |
|
|
|
|
Template Sequence |   |
F | R | P | G | T | C | E | R | L | G | I | G | P | D | D | C | A | S | V | N | P | . |
R | L | I | F | A | R | I | T | G |
Template Known Secondary structure |   |
S |
| T | T |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |
| T | . | T |
|  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|