Job Description P55135 Confidence 99.97% Date Thu Jan 5 12:06:06 GMT 2012 Rank 8 Aligned Residues 309 % Identity 20% Template c2as0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ph1915; PDBTitle: crystal structure of ph1915 (apc 5817): a hypothetical rna2 methyltransferase Resolution 1.80 Å

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.											.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																		.	.	.														.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																		.	.	.														.	.	.	.	.
Query Sequence		A	D	V	P	W	G	Y	R	R	R	A	R	L	S	L	N	Y	.	.	.	.	.	.	.	.	.	.	L	P	K	T	Q	Q	L	Q	M	G	F	R	K	A	G	S	S	.	.	.	D	I	V	D	V	K	Q	C	P	I	L	A	P	.	.	.	.	.	Q	L	E	A	L	L	P	K	V	R	A	C	L	G	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.																		.	.	.														.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																		.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		K	G	A	X	I	V	F	K	K	G	V	V	R	V	E	G	D	I	K	P	G	D	I	V	E	V	Y	T	R	G	G	K	F	L	G	K	G	F	A	N	P	N	S	N	I	X	V	R	I	V	T	K	D	K	D	V	E	I	N	K	D	L	F	K	R	R	I	K	K	A	N	E	Y	R	K	K	V	L	K	Y
Template Known Secondary structure		T	T						G	G	G						S				T	T								T	T											T	T	S	S								S		T	T				S																		T	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		183	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																						.	.	.	.																											.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																						.	.	.	.																											.	.	.	.	.	.	.	.
Query Sequence		L	Q	A	M	R	H	.	.	.	.	.	L	G	H	V	E	L	V	Q	A	T	S	G	T	L	M	I	L	R	H	T	A	.	.	.	.	P	L	S	S	A	D	R	E	K	L	E	R	F	S	H	S	E	G	L	D	L	Y	L	A	P	D	.	.	.	.	.	.	.	.	S	E	I	L	E	T	V	S	G	E
Query Conservation								.	.	.	.	.																						.	.	.	.																											.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																						.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	V	Y	R	X	V	Y	G	E	A	D	Y	L	P	G	L	I	V	D	R	F	N	D	I	A	S	L	Q	I	S	S	A	G	X	E	R	F	K	L	D	V	A	E	A	I	X	E	V	E	P	G	I	E	T	V	F	E	K	N	T	G	R	S	R	R	R	E	G	L	P	E	I	E	R	V	L	L	G	K
Template Known Secondary structure			S							G	G	G	G	T		T	T							T	T													T	T													T	T										S						T	T											S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
					246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure		.	.	.																																																															.
Query SS confidence		.	.	.																																																															.
Query Sequence		.	.	.	M	P	W	Y	D	S	N	G	L	R	L	T	F	S	P	R	D	F	I	Q	V	N	A	G	V	N	Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	Q	.	A	A	S	V	V	G	V	E	G	V	P	A	L	V
Query Conservation		.	.	.																																																															.
Alig confidence		.	.	.															.	.																																															.
Template Conservation																			.	.
Template Sequence		E	K	Y	R	T	I	I	Q	E	G	R	A	K	F	I	V	D	.	.	X	R	G	Q	K	T	G	F	F	L	D	Q	R	E	N	R	L	A	L	E	K	W	V	Q	P	G	D	R	V	L	D	V	F	T	Y	T	G	G	F	A	I	H	A	A	I	A	G	A	D	E	V	I	G	I	D	K	S	P	R	A	I
Template Known Secondary structure											T	T							.	.	S	S	S	S	S	S				S	T	T								G	G	G			T	T						T	T		T	T	T									T	T		S							S
Template Predicted Secondary structure																			.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.													.	380	.		.	.	.	.	.
Predicted Secondary structure																	.																																		.										.	.	.	.	.	.	.	.	.	.	.	.				.
Query SS confidence																	.																																		.										.	.	.	.	.	.	.	.	.	.	.	.				.
Query Sequence		E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	.	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	.	A	G	V	M	Q	Q	I	I	K	.	.	.	.	.	.	.	.	.	.	.	.	L	E	P	.	I	R	I	V	Y
Query Conservation																	.																																		.										.	.	.	.	.	.	.	.	.	.	.	.				.
Alig confidence																	.																																		.										.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation
Template Sequence		E	T	A	K	E	N	A	K	L	N	G	V	E	D	R	X	K	F	I	V	G	S	A	F	E	E	X	E	K	L	Q	K	K	G	E	K	F	D	I	V	V	L	D	P	P	A	F	V	Q	H	E	K	D	L	K	A	G	L	R	A	Y	F	N	V	N	F	A	G	L	N	L	V	K	D	G	G	I	L	V	T
Template Known Secondary structure											T	T		G	G	G						S												T	T													S		S	S	G	G	G																	T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		387	.	.	390	.	.	.						.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.						.	.	.	.						.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure									.	.	.	.	.																			.	.	.	.	.					.	.	.	.	.
Query SS confidence									.	.	.	.	.																			.	.	.	.	.					.	.	.	.	.
Query Sequence		V	S	C	N	P	A	T	.	.	.	.	.	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I	A	R	L	.	.	.	.	.	A	M	L	D	.	.	.	.	.	M	F	P	H	T	G	H	L	E	S	M	V	L	F	S	R
Query Conservation									.	.	.	.	.																			.	.	.	.	.					.	.	.	.	.
Alig confidence									.	.	.	.	.																			.	.	.	.	.					.	.	.	.	.
Template Conservation
Template Sequence		C	S	C	S	Q	H	V	D	L	Q	X	F	K	D	X	I	I	A	A	G	A	K	A	G	K	F	L	K	X	L	E	P	Y	R	T	Q	A	P	D	H	P	I	L	X	A	S	K	D	T	E	Y	L	K	C	L	F	L	Y	V	E
Template Known Secondary structure						T	T	S																T	T						S	S			B		S		T	T	S				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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