Job Description P55135 Confidence 64.56% Date Thu Jan 5 12:06:06 GMT 2012 Rank 432 Aligned Residues 75 % Identity 16% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370		.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.
Predicted Secondary structure																																																														.		.													.
Query SS confidence																																																														.		.													.
Query Sequence		S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	.	A	.	G	V	M	Q	Q	I	I	K	L	E	P	I	.	R	I	V	Y
Query Conservation																																																														.		.													.
Alig confidence																													.	.														.	.																	.		.													.
Template Conservation																													.	.														.	.
Template Sequence		N	V	L	V	I	E	D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	.	.	S	A	E	R	G	K	E	A	Y	K	L	L	S	.	.	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T	E	V	I	V
Template Known Secondary structure																								T					.	.			S	S										.	.		S			S						S	B		S	S	S	B													T	T	S
Template Predicted Secondary structure																													.	.														.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		387	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		78	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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