Job Description P55135 Confidence 61.47% Date Thu Jan 5 12:06:06 GMT 2012 Rank 443 Aligned Residues 101 % Identity 15% Template c1mv8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		296	.	.	.	300	.	.	.	.	.					.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.													.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	G	N	F	T	L	P	L	A	.	.	.	.	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K
Query Conservation												.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		G	L	G	Y	V	G	A	V	C	A	G	C	L	S	A	R	G	H	E	V	I	G	V	D	V	S	S	T	K	I	D	L	I	N	Q	G	K	S	P	I	V	E	P	G	L	E	A	L	L	Q	Q	G	R	Q	T	G	R	L	S	G	T	T	D	F	K	K	A	V	L	D	S	.	.	.	.	.	.	.	D	V
Template Known Secondary structure				S	T	T											T	T								S										T	T			S	S			T	T											T	T						S								T		.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.
		360	.	.	.	.	.															.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		V	L	L	D	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	A	A	G	V	M	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	.	.	N	P	A	T	L	A	R	D	S	E	A	L	L	K
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		S	F	I	C	V	G	T	P	S	K	K	N	G	D	L	D	L	G	Y	I	E	T	V	C	R	E	I	G	F	A	I	R	E	K	S	E	R	H	T	V	V	V	R	S	T	V	L	P	G	T	V	N	N	V	V	I	P	L	I	E
Template Known Secondary structure										B		T	T	S	S	B																	T	T			S								S				T	T					T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions