Job Description P55135 Confidence 97.71% Date Thu Jan 5 12:06:06 GMT 2012 Rank 298 Aligned Residues 104 % Identity 17% Template c1i4wA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mitochondrial replication protein mtf1; PDBTitle: the crystal structure of the transcription factor sc-mttfb2 offers intriguing insights into mitochondrial transcription Resolution 2.60 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.							.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																						.	.
Query SS confidence																.	.	.	.	.	.																						.	.
Query Sequence		Q	K	M	V	A	R	A	L	E	W	L	D	V	Q	.	.	.	.	.	.	P	E	D	R	V	L	D	L	F	C	G	M	G	N	F	T	L	P	L	A	T	.	.	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L
Query Conservation																.	.	.	.	.	.																						.	.
Alig confidence																.	.	.	.	.	.																						.	.																									.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		P	T	V	Y	N	K	I	F	D	K	L	D	L	T	K	T	Y	K	H	P	E	E	L	K	V	L	D	L	Y	P	G	V	G	I	Q	S	A	I	F	Y	N	K	Y	C	P	R	Q	Y	S	L	L	E	K	R	S	S	L	Y	K	F	L	N	A	K	F	E	G	.	.	.	S	P	L	Q	I	L	K	R	D	P
Template Known Secondary structure														G	G	G	T				T	T	T							S		T	T														S																			T	T	T	.	.	.	S	S						S		T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.																.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	L	D	P	A	R	A	G	A	A	G	V	M	Q	Q	I	I	K
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	W	S	T	Y	S	N	L	I	D	E	E	R	I	F	V	P	E	V	Q	S	S	D	H	I	N	D	K	F	L	T	V	A	N	V	T	G	E	G	S	E	G	L	I	M	Q	W	L	S
Template Known Secondary structure		T									T	T	T	T		S	S							T	T	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions