Job Description P76548 Confidence 1.24% Date Thu Jan 5 12:24:25 GMT 2012 Rank 74 Aligned Residues 53 % Identity 28% Template c3eg9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein transport protein sec23a; PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin Resolution 3.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.																	.	.
Query SS confidence																						.	.	.	.	.																	.	.
Query Sequence		G	D	R	L	A	R	V	E	I	E	Y	I	A	T	L	C	K	P	V	A	.	.	.	.	.	L	V	I	I	Y	D	R	F	D	D	I	A	A	I	P	L	.	.	K	V	T	L	K	K	V	L	K	E	N	S	D	E	K	I	N	L	L	N	K	M
Query Conservation																						.	.	.	.	.																	.	.
Alig confidence										.	.	.	.	.								.	.	.	.	.																	.	.
Template Conservation										.	.	.	.	.
Template Sequence		G	Q	R	R	I	R	V	T	.	.	.	.	.	T	I	A	R	N	W	A	D	A	Q	T	Q	I	Q	N	I	A	A	S	F	D	Q	E	A	A	A	I	L	M	A	R	L	A	I	Y	R	A	E	T	E	E	G	P	D	V	L	R	W	L	D	R	Q
Template Known Secondary structure		S								.	.	.	.	.																			T																				T	T			T
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		490	.	.	.	.	.	.	.						.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions