Return to main results Retrieve Phyre Job Id

Job DescriptionP76548
Confidence1.20%DateThu Jan 5 12:24:25 GMT 2012
Rank78Aligned Residues10
% Identity50%Templatec3dnlB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:hiv-1 envelope glycoprotein gp120; PDBTitle: molecular structure for the hiv-1 gp120 trimer in the b12-2 bound state
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40....
Predicted Secondary structure 



Query SS confidence 









Query Sequence  SVVTDNCEKT
Query Conservation 









Alig confidence 









Template Conservation 
 


 
 
 
Template Sequence  SVITQACPKV
Template Known Secondary structure 









Template Predicted Secondary structure 





Template SS confidence 









   199200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions