Return to main results Retrieve Phyre Job Id

Job DescriptionP76548
Confidence6.01%DateThu Jan 5 12:24:25 GMT 2012
Rank4Aligned Residues50
% Identity14%Templatec2r5oA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:putative atp binding component of abc- PDBTitle: crystal structure of the c-terminal domain of wzt
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.... .....40.........50... ......60.........70......
Predicted Secondary structure 



..






.


Query SS confidence 







. .


















.






















Query Sequence  GEDNARIE. . SVVTDNCEKTAVLVGGDRL. ARVEIEYIATLCKPVALVIIYDR
Query Conservation 







..


















.






















Alig confidence 







..


















.






















Template Conservation 
 
 
 
  
 
 
  
        

 
 
 
 
     
  

 
  

  
Template Sequence  GQGGAKIIDYHIQSAGVDFPPSLTGNQQTDFLMKVVFEYDFDCVVPGILIKTL
Template Known Secondary structure 


STTS
SSTT
SS
T
Template Predicted Secondary structure 






















Template SS confidence 




















































   287..290.........300.........310.........320.........330.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions