Job Description P0A9Q7 Confidence 88.62% Date Thu Jan 5 11:11:00 GMT 2012 Rank 119 Aligned Residues 190 % Identity 14% Template d2liva_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.40

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																			.	.														.	.																							.	.	.
Query SS confidence																			.	.														.	.																							.	.	.
Query Sequence		D	F	E	D	A	V	E	K	A	E	K	L	V	A	M	G	G	.	.	I	G	H	T	S	C	L	Y	T	D	Q	D	N	.	.	Q	P	A	R	V	S	Y	F	G	Q	K	M	K	T	A	R	I	L	I	N	T	P	.	.	.	A	S	Q	G	G	I	G	D	L	Y	N	F	K	L	A	P	S	L	T	L	G
Query Conservation																			.	.														.	.																							.	.	.
Alig confidence																			.	.														.	.																							.	.	.
Template Conservation
Template Sequence		Q	E	F	T	G	A	E	Q	A	V	A	D	I	N	A	K	G	G	I	K	G	N	K	L	Q	I	A	K	Y	D	D	A	C	D	P	K	Q	A	V	A	V	A	N	K	V	V	N	D	G	I	K	Y	V	I	G	H	L	C	S	S	S	T	Q	P	A	S	D	I	Y	E	D	E	G	I	L	M	I	T	P	A
Template Known Secondary structure																	T	T	T	B	T	T	B										T	T															T	T									S														T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	S	W	G	G	N	S	I	S	E	N	V	G	P	K	H	L	I	N	K	K	T	V	A	K	R	A	E	N	M	L	W	H	K	L	P	K	S	I	Y	F	R	R	G	S	L	P	I	A	L	D	E	V	I	T	D	G	H	K	R	A	L	I	V	T	D	R	F	L	F	N	N	G	Y	A	D	Q	I	T
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		A	T	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	A	R	G	Y	Q	L	I	L	R	T	T	G	L	D	S	D	Q	G	P	T	A	A	K	Y	.	.	.	I	L	E	K	V	K	P	Q	R	I	A	I	V	H	D	K	Q	Q	Y	G	E	G	L	A	R	A	V	Q
Template Known Secondary structure					G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	S	S			S	S					S			G	G	G									.	.	.				T	T			S	S							S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		101	.	.	.	.																			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	K	A	A	G	V	E	T	E	V	F	F	E	V	E	A	D	P	T	L	S	I	V	R	K	G	A	E	L	A	N	S	F	K	P	D	V	I	I	A	L	G	G	G	S	P	M	D	A	A	K	I	M	W	V	M	Y	E	H	P
Query Conservation
Alig confidence																							.	.																									.	.
Template Conservation																							.	.																									.	.
Template Sequence		D	G	L	K	K	G	N	A	N	V	V	F	F	D	G	I	T	A	G	E	K	.	.	D	F	S	T	L	V	A	R	L	K	K	E	N	I	D	F	V	Y	Y	G	G	Y	H	P	.	.	E	M	G	Q	I	L	R	Q	A	R	A	A	G
Template Known Secondary structure						T	T	T											T	T			.	.												T	T		S						S				.	.												T	T
Template Predicted Secondary structure																							.	.																									.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions